SIMPLE Test Report - trpm4
SIMPLE test run
Execution times
1h 08m 01.1sTotal across 11 timed test steps
| Test step | Program | Duration |
|---|---|---|
| 11_refine3D_auto | refine3D_auto | 16m 14.1s974.1 seconds |
| 10_abinitio3D | abinitio3D | 32m 34.3s1954.3 seconds |
| 9_abinitio3D_cavgs | abinitio3D_cavgs | 8m 07.6s487.6 seconds |
| 8_model_cavgs_rejection | model_cavgs_rejection | 1.5s1.5 seconds |
| 7_abinitio2D | abinitio2D | 3m 04.3s184.3 seconds |
| 6_extract | extract | 4.1s4.1 seconds |
| 5_pick | pick | 49.4s49.4 seconds |
| 4_selection | selection | 0.1s0.1 seconds |
| 3_ctf_estimate | ctf_estimate | 19.2s19.2 seconds |
| 2_motion_correct | motion_correct | 6m 18.0s378.0 seconds |
| 1_import_movies | import_movies | 28.5s28.5 seconds |
Total is the sum of execution times recorded by SIMPLE in this test LOG.
11_refine3D_auto16m 14.1s
orientations_distribution_state01.jpg
orthogonal_reprojs_state01.jpg
LOG summary: PROGRAM refine3D_auto
>>> IN-PLANE DIST (DEG) AVG/SDEV/MIN/MAX: 1.066 6.539 0.000 109.636 >>> SHIFT INCR ARG AVG/SDEV/MIN/MAX: 0.294 0.212 0.000 1.619 >>> % SEARCH SPACE SCANNED AVG/SDEV/MIN/MAX: 100.000 0.000 100.000 100.000 >>> MATCHING LOW-PASS LIMIT (THIS ITERATION) 6.051 >>> NU HANDOFF LP (NEXT) AVG/SDEV/MIN/MAX: 6.051 0.000 6.051 6.051 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 8.758 0.000 8.758 8.758 >>> RESOLUTION @ FSC=0.5 AVG/SDEV/MIN/MAX: 14.470 0.000 14.470 14.470 >>> SCORE [0,1] AVG/SDEV/MIN/MAX: 0.382 0.004 0.374 0.404 >>> -------------------- SETTINGS -------------------- >>> | REFINEMENT MODE | prob_neigh >>> | PROB NEIGH MODE | state >>> | NSPACE PROJECTION DIRECTIONS | 20000 >>> | GAU REGULARIZATION | off >>> | ML REGULARIZATION | on, TAU: 1.00000000 >>> | CONICAL REGULARIZATION | off >>> | ICM REGULARIZATION | off >>> | AUTOMASKING | on, MODE: yes >>> | FILTER MODE | nonuniform >>> -------------------------------------------------- >>> CONVERGED: no **** SIMPLE_CALC_GROUP_SIGMAS NORMAL STOP **** **** SIMPLE_REFINE3D NORMAL STOP **** >>> >>> RECONSTRUCTION AT ORIGINAL SAMPLING >>> >>> FINAL RECONSTRUCTION SAMPLING: box=256 smpd= 1.3000 >>> FINAL RECONSTRUCTION: reusing committed canonical sigmas >>> # SHARED-MEMORY THREADS USED BY rec3D MASTER PROCESS: 8 >>> RECONSTRUCT3D: 10 PART(S) COMPLETED IN 4.0 s >>> AUTOMASKING LOW-PASS/DILATION LAYERS/EDGE: 20.00 A/ 6 voxels/ 6 voxels >>> FOUND: 1 CONNECTED COMPONENT(S) >>> FSC MODE: STATE 1, backend=gridding support=sphere posthoc_mask=density phase_randomization=yes >>> FSC AREA SCORE / CONICAL FSC AREA RATIO (cFAR) STATE 1: 0.0005 **** SIMPLE_VOLASSEMBLE NORMAL STOP **** >>> POSTPROCESS: FSC from fsc_state01.bin, 0.5/0.143 at 14.47/ 10.74 A >>> POSTPROCESS: ML-regularized map (solve_kind=gridding_regularized), its prior already FSC-weighted it: no FSC weighting >>> POSTPROCESS: B-sharpened, then Butterworth low-pass at 10.74 A **** SIMPLE_RECONSTRUCT3D NORMAL STOP **** **** SIMPLE Git Commit: 3cad71a1 **** Execution time: 974.1 seconds
10_abinitio3D32m 34.3s
orientations_distribution_state01.jpg
orientations_distribution_state01_stage04.jpg
orientations_distribution_state01_stage05.jpg
orientations_distribution_state01_stage06.jpg
orientations_distribution_state01_stage07.jpg
orientations_distribution_state01_stage08.jpg
orthogonal_reprojs_state01.jpg
orthogonal_reprojs_state01_stage04.jpg
orthogonal_reprojs_state01_stage05.jpg
orthogonal_reprojs_state01_stage06.jpg
orthogonal_reprojs_state01_stage07.jpg
orthogonal_reprojs_state01_stage08.jpg
LOG summary: PROGRAM abinitio3D
Recent FSC=0.143 resolution estimates: >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 10.735 0.000 10.735 10.735 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 10.400 0.000 10.400 10.400 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 10.735 0.000 10.735 10.735 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 10.735 0.000 10.735 10.735 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 10.735 0.000 10.735 10.735 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 8.995 0.000 8.995 8.995 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 10.400 0.000 10.400 10.400 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 9.509 0.000 9.509 9.509 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 8.758 0.000 8.758 8.758 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 8.533 0.000 8.533 8.533 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 8.533 0.000 8.533 8.533 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 8.533 0.000 8.533 8.533 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 8.533 0.000 8.533 8.533 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 8.533 0.000 8.533 8.533 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 8.533 0.000 8.533 8.533 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 8.533 0.000 8.533 8.533 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 8.320 0.000 8.320 8.320 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 8.320 0.000 8.320 8.320 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 8.320 0.000 8.320 8.320 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 8.117 0.000 8.117 8.117 Status: **** SIMPLE_VOLASSEMBLE NORMAL STOP **** **** SIMPLE_POSTPROCESS NORMAL STOP **** **** SIMPLE_CALC_GROUP_SIGMAS NORMAL STOP **** **** SIMPLE_REFINE3D NORMAL STOP **** **** SIMPLE_CALC_PSPEC_ASSEMBLE NORMAL STOP **** **** SIMPLE_CALC_PSPEC NORMAL STOP **** **** SIMPLE_VOLASSEMBLE NORMAL STOP **** **** SIMPLE_RECONSTRUCT3D NORMAL STOP **** **** SIMPLE_CALC_GROUP_SIGMAS NORMAL STOP **** **** SIMPLE_REFINE3D NORMAL STOP **** **** SIMPLE_VOLASSEMBLE NORMAL STOP **** **** SIMPLE_RECONSTRUCT3D NORMAL STOP **** **** SIMPLE_BOOTSTRAP_REC3D NORMAL STOP **** **** SIMPLE_ABINITIO3D NORMAL STOP **** **** SIMPLE Git Commit: 3cad71a1 **** Execution time: 1954.3 seconds
9_abinitio3D_cavgs8m 07.6s
orientations_distribution_state01.jpg
LOG summary: PROGRAM abinitio3D_cavgs
>>> **** SIMPLE_CALC_GROUP_SIGMAS NORMAL STOP **** **** SIMPLE_REFINE3D NORMAL STOP **** >>> BOOTSTRAP_REC3D: EUCLID ML-REGULARIZED RECONSTRUCTION ON RESIDUAL SIGMAS, SIGMA ITERATION 99 >>> FSC MODE: STATE 1, backend=gridding support=sphere posthoc_mask=none phase_randomization=no >>> FSC AREA SCORE / CONICAL FSC AREA RATIO (cFAR) STATE 1: 0.0057 **** SIMPLE_VOLASSEMBLE NORMAL STOP **** **** SIMPLE_RECONSTRUCT3D NORMAL STOP **** **** SIMPLE_BOOTSTRAP_REC3D NORMAL STOP **** >>> >>> RE-PROJECTION OF THE FINAL VOLUME >>> >>> GENERATING PROJECTIONS **** SIMPLE_REPROJECT NORMAL STOP **** >>> SHIFTING IMAGES CLASS: 55 RANK: 1 CORR: 0.49 CLASS: 47 RANK: 2 CORR: 0.48 CLASS: 32 RANK: 3 CORR: 0.47 CLASS: 29 RANK: 4 CORR: 0.46 CLASS: 50 RANK: 5 CORR: 0.45 CLASS: 46 RANK: 6 CORR: 0.45 CLASS: 36 RANK: 7 CORR: 0.43 CLASS: 10 RANK: 8 CORR: 0.43 CLASS: 21 RANK: 9 CORR: 0.42 CLASS: 24 RANK: 10 CORR: 0.42 CLASS: 76 RANK: 11 CORR: 0.42 CLASS: 66 RANK: 12 CORR: 0.42 CLASS: 11 RANK: 13 CORR: 0.41 CLASS: 72 RANK: 14 CORR: 0.41 CLASS: 63 RANK: 15 CORR: 0.41 CLASS: 68 RANK: 16 CORR: 0.40 CLASS: 8 RANK: 17 CORR: 0.40 CLASS: 43 RANK: 18 CORR: 0.40 CLASS: 87 RANK: 19 CORR: 0.39 CLASS: 30 RANK: 20 CORR: 0.39 CLASS: 81 RANK: 21 CORR: 0.39 **** SIMPLE_RANK_CAVGS NORMAL STOP **** **** SIMPLE_ABINITIO3D_CAVGS NORMAL STOP **** **** SIMPLE Git Commit: 3cad71a1 **** Execution time: 487.6 seconds
8_model_cavgs_rejection1.5s
LOG summary: PROGRAM model_cavgs_rejection
>>> PROGRAM: model_cavgs_rejection >>> EXECUTION DIRECTORY: 8_model_cavgs_rejection >>> CAVG QUALITY MODEL : chunk100mics >>> CAVG QUALITY MODEL SOURCE : built-in preset chunk100mics >>> CAVG QUALITY MODEL CONTEXT : chunk >>> CAVG HARD-GATE CONTEXT : chunk >>> CAVG HARD-GATE SOURCE : model artifact >>> DEFAULT HARD GATES REJECTED: 65 >>> CAVG QUALITY SELECTED / REJECTED : 21 / 69 >>> CAVG QUALITY THRESHOLD RAW / OFFSET / EFFECTIVE : 0.350 / 0.000 / 0.350 >>> CAVG QUALITY SEPARATION / USED THRESHOLD : 0.000 USED=T >>> WROTE cavgs_quality_features.txt >>> WROTE quality_selected_cavgs.mrc #CAVGS: 21 >>> WROTE quality_rejected_cavgs.mrc #CAVGS: 69 >>> WROTE hard_gate_rejections.mrc #CAVGS: 65 >>> WROTE quality_ranked_cavgs.mrc #CAVGS: 90 >>> WROTE quality_ranked_cavgs.txt **** SIMPLE_MODEL_CAVGS_REJECTION NORMAL STOP **** **** SIMPLE Git Commit: 3cad71a1 **** Execution time: 1.5 seconds
7_abinitio2D3m 04.3s
cavgs_iter027.jpg
LOG summary: PROGRAM abinitio2D
Final class ranking and status: CLASS: 30 RANK: 1 POP: 63 RES: 18.49 CLASS: 68 RANK: 2 POP: 57 RES: 18.49 CLASS: 76 RANK: 3 POP: 72 RES: 18.49 CLASS: 54 RANK: 4 POP: 121 RES: 19.58 CLASS: 72 RANK: 5 POP: 80 RES: 19.58 CLASS: 87 RANK: 6 POP: 45 RES: 19.58 CLASS: 81 RANK: 7 POP: 101 RES: 22.19 CLASS: 43 RANK: 8 POP: 65 RES: 22.19 CLASS: 36 RANK: 9 POP: 40 RES: 22.19 CLASS: 40 RANK: 10 POP: 14 RES: 22.19 CLASS: 10 RANK: 11 POP: 49 RES: 23.77 CLASS: 55 RANK: 12 POP: 36 RES: 23.77 CLASS: 63 RANK: 13 POP: 35 RES: 23.77 CLASS: 66 RANK: 14 POP: 72 RES: 23.77 CLASS: 73 RANK: 15 POP: 88 RES: 25.60 CLASS: 46 RANK: 16 POP: 51 RES: 25.60 CLASS: 52 RANK: 17 POP: 7 RES: 27.73 CLASS: 50 RANK: 18 POP: 47 RES: 27.73 CLASS: 32 RANK: 19 POP: 35 RES: 27.73 CLASS: 29 RANK: 20 POP: 30 RES: 27.73 CLASS: 48 RANK: 21 POP: 13 RES: 27.73 CLASS: 3 RANK: 22 POP: 23 RES: 27.73 CLASS: 15 RANK: 23 POP: 7 RES: 30.25 CLASS: 24 RANK: 24 POP: 45 RES: 30.25 CLASS: 47 RANK: 25 POP: 20 RES: 30.25 CLASS: 21 RANK: 26 POP: 27 RES: 33.28 CLASS: 11 RANK: 27 POP: 35 RES: 33.28 CLASS: 5 RANK: 28 POP: 65 RES: 33.28 CLASS: 62 RANK: 29 POP: 9 RES: 36.98 CLASS: 44 RANK: 30 POP: 9 RES: 36.98 CLASS: 16 RANK: 31 POP: 16 RES: 36.98 CLASS: 78 RANK: 32 POP: 10 RES: 36.98 CLASS: 84 RANK: 33 POP: 27 RES: 36.98 CLASS: 82 RANK: 34 POP: 25 RES: 36.98 CLASS: 8 RANK: 35 POP: 19 RES: 36.98 CLASS: 49 RANK: 36 POP: 92 RES: 41.60 CLASS: 90 RANK: 37 POP: 111 RES: 41.60 CLASS: 88 RANK: 38 POP: 131 RES: 41.60 CLASS: 19 RANK: 39 POP: 98 RES: 41.60 CLASS: 71 RANK: 40 POP: 20 RES: 41.60 CLASS: 2 RANK: 41 POP: 97 RES: 41.60 CLASS: 61 RANK: 42 POP: 102 RES: 47.54 CLASS: 13 RANK: 43 POP: 64 RES: 47.54 CLASS: 25 RANK: 44 POP: 95 RES: 47.54 CLASS: 17 RANK: 45 POP: 66 RES: 47.54 CLASS: 67 RANK: 46 POP: 7 RES: 47.54 CLASS: 33 RANK: 47 POP: 51 RES: 47.54 CLASS: 1 RANK: 48 POP: 42 RES: 47.54 CLASS: 58 RANK: 49 POP: 115 RES: 55.47 CLASS: 14 RANK: 50 POP: 6 RES: 55.47 CLASS: 26 RANK: 51 POP: 25 RES: 55.47 CLASS: 51 RANK: 52 POP: 73 RES: 55.47 CLASS: 23 RANK: 53 POP: 70 RES: 55.47 CLASS: 89 RANK: 54 POP: 78 RES: 55.47 CLASS: 86 RANK: 55 POP: 20 RES: 55.47 CLASS: 85 RANK: 56 POP: 7 RES: 55.47 CLASS: 20 RANK: 57 POP: 50 RES: 55.47 CLASS: 79 RANK: 58 POP: 10 RES: 55.47 CLASS: 38 RANK: 59 POP: 10 RES: 55.47 CLASS: 37 RANK: 60 POP: 12 RES: 55.47 CLASS: 18 RANK: 61 POP: 72 RES: 55.47 CLASS: 9 RANK: 62 POP: 94 RES: 55.47 CLASS: 70 RANK: 63 POP: 98 RES: 55.47 CLASS: 31 RANK: 64 POP: 5 RES: 66.56 CLASS: 7 RANK: 65 POP: 102 RES: 66.56 CLASS: 59 RANK: 66 POP: 93 RES: 66.56 CLASS: 57 RANK: 67 POP: 74 RES: 66.56 CLASS: 56 RANK: 68 POP: 103 RES: 66.56 CLASS: 28 RANK: 69 POP: 7 RES: 66.56 CLASS: 53 RANK: 70 POP: 34 RES: 66.56 CLASS: 12 RANK: 71 POP: 8 RES: 66.56 CLASS: 45 RANK: 72 POP: 115 RES: 66.56 CLASS: 22 RANK: 73 POP: 83 RES: 66.56 CLASS: 83 RANK: 74 POP: 19 RES: 66.56 CLASS: 39 RANK: 75 POP: 8 RES: 66.56 CLASS: 77 RANK: 76 POP: 69 RES: 66.56 CLASS: 74 RANK: 77 POP: 123 RES: 66.56 CLASS: 69 RANK: 78 POP: 17 RES: 66.56 CLASS: 34 RANK: 79 POP: 97 RES: 66.56 CLASS: 4 RANK: 80 POP: 4 RES: 66.56 CLASS: 27 RANK: 81 POP: 108 RES: 83.20 CLASS: 80 RANK: 82 POP: 90 RES: 83.20 CLASS: 75 RANK: 83 POP: 109 RES: 83.20 CLASS: 41 RANK: 84 POP: 13 RES: 166.40 Status: **** SIMPLE_CAVGASSEMBLE NORMAL STOP **** **** SIMPLE_CALC_GROUP_SIGMAS NORMAL STOP **** **** SIMPLE_PROB_ALIGN2D NORMAL STOP **** **** SIMPLE_CAVGASSEMBLE NORMAL STOP **** **** SIMPLE_CALC_GROUP_SIGMAS NORMAL STOP **** **** SIMPLE_CLUSTER2D NORMAL STOP **** **** SIMPLE_CAVGASSEMBLE NORMAL STOP **** **** SIMPLE_DISTR_MAKE_CAVGS NORMAL STOP **** **** SIMPLE_RANK_CAVGS NORMAL STOP **** **** SIMPLE_ABINITIO2D NORMAL STOP **** **** SIMPLE Git Commit: 3cad71a1 **** Execution time: 184.3 seconds
6_extract4.1s
ptcls_sample.jpg
ptcls_sample_lp.jpg
LOG summary: PROGRAM extract
100. percent micrographs marker not found; recent extract diagnostics: >>> EXTRACT: 5 PART(S) COMPLETED IN 3.0 s **** SIMPLE_EXTRACT_DISTR NORMAL STOP **** **** SIMPLE Git Commit: 3cad71a1 **** Execution time: 4.1 seconds
5_pick49.4s
LOG summary: PROGRAM pick
100. percent micrographs marker not found; recent pick diagnostics: >>> PICK: 5 PART(S) COMPLETED IN 49.0 s **** SIMPLE_DISTR_PICK NORMAL STOP **** **** SIMPLE Git Commit: 3cad71a1 **** Execution time: 49.4 seconds
4_selection0.1s
LOG summary: PROGRAM selection
Final class ranking and status: **** SELECTION NORMAL STOP **** **** SIMPLE Git Commit: 3cad71a1 **** Execution time: 0.1 seconds
3_ctf_estimate19.2s
FoilHole_13387161_Data_13384792_13384794_20231113_165813_EER_ctf_estimate_diag.jpg
FoilHole_13387165_Data_13384789_13384791_20231113_170618_EER_ctf_estimate_diag.jpg
FoilHole_13391968_Data_13384795_13384797_20231113_174255_EER_ctf_estimate_diag.jpg
FoilHole_13391979_Data_13384789_13384791_20231113_172647_EER_ctf_estimate_diag.jpg
FoilHole_13396191_Data_13384789_13384791_20231113_180300_EER_ctf_estimate_diag.jpg
FoilHole_13396227_Data_13384798_13384800_20231113_181309_EER_ctf_estimate_diag.jpg
FoilHole_13396273_Data_13384795_13384797_20231113_182757_EER_ctf_estimate_diag.jpg
FoilHole_13400338_Data_13384795_13384797_20231113_185413_EER_ctf_estimate_diag.jpg
FoilHole_14354074_Data_13384792_13384794_20231113_191229_EER_ctf_estimate_diag.jpg
FoilHole_14358292_Data_13384798_13384800_20231113_202222_EER_ctf_estimate_diag.jpg
FoilHole_14358323_Data_13384789_13384791_20231113_201921_EER_ctf_estimate_diag.jpg
FoilHole_14362957_Data_13384789_13384791_20231113_204512_EER_ctf_estimate_diag.jpg
FoilHole_14362991_Data_13384795_13384797_20231113_204437_EER_ctf_estimate_diag.jpg
FoilHole_14367062_Data_13384789_13384791_20231113_213638_EER_ctf_estimate_diag.jpg
FoilHole_14367067_Data_13384789_13384791_20231113_214059_EER_ctf_estimate_diag.jpg
FoilHole_14367072_Data_13384789_13384791_20231113_213306_EER_ctf_estimate_diag.jpg
FoilHole_14367086_Data_13384792_13384794_20231113_212858_EER_ctf_estimate_diag.jpg
FoilHole_14370764_Data_13384792_13384794_20231113_215208_EER_ctf_estimate_diag.jpg
FoilHole_14370782_Data_13384798_13384800_20231113_220255_EER_ctf_estimate_diag.jpg
FoilHole_14370802_Data_13384792_13384794_20231113_220044_EER_ctf_estimate_diag.jpg
FoilHole_14374378_Data_13384789_13384791_20231113_222157_EER_ctf_estimate_diag.jpg
FoilHole_14374442_Data_13384789_13384791_20231113_225417_EER_ctf_estimate_diag.jpg
FoilHole_14378481_Data_13384792_13384794_20231113_232128_EER_ctf_estimate_diag.jpg
FoilHole_14382746_Data_13384792_13384794_20231114_000018_EER_ctf_estimate_diag.jpg
FoilHole_14394649_Data_13384795_13384797_20231114_013725_EER_ctf_estimate_diag.jpg
FoilHole_14394654_Data_13384792_13384794_20231114_013853_EER_ctf_estimate_diag.jpg
FoilHole_14394683_Data_13384792_13384794_20231114_014537_EER_ctf_estimate_diag.jpg
FoilHole_14401758_Data_13384798_13384800_20231114_024605_EER_ctf_estimate_diag.jpg
FoilHole_14401775_Data_13384795_13384797_20231114_030350_EER_ctf_estimate_diag.jpg
FoilHole_14405427_Data_13384792_13384794_20231114_031216_EER_ctf_estimate_diag.jpg
FoilHole_14408762_Data_13384798_13384800_20231114_034411_EER_ctf_estimate_diag.jpg
FoilHole_14412902_Data_13384795_13384797_20231114_041646_EER_ctf_estimate_diag.jpg
FoilHole_14426830_Data_13384795_13384797_20231114_063117_EER_ctf_estimate_diag.jpg
FoilHole_14430065_Data_13384795_13384797_20231114_070734_EER_ctf_estimate_diag.jpg
FoilHole_14446546_Data_13384789_13384791_20231114_090031_EER_ctf_estimate_diag.jpg
FoilHole_14446549_Data_13384798_13384800_20231114_090159_EER_ctf_estimate_diag.jpg
FoilHole_14446557_Data_13384795_13384797_20231114_090503_EER_ctf_estimate_diag.jpg
FoilHole_14446590_Data_13384795_13384797_20231114_091600_EER_ctf_estimate_diag.jpg
FoilHole_14449639_Data_13384789_13384791_20231114_093547_EER_ctf_estimate_diag.jpg
FoilHole_14453792_Data_13384789_13384791_20231114_101644_EER_ctf_estimate_diag.jpg
FoilHole_14456696_Data_13384792_13384794_20231114_103123_EER_ctf_estimate_diag.jpg
FoilHole_14456728_Data_13384789_13384791_20231114_104153_EER_ctf_estimate_diag.jpg
FoilHole_14459607_Data_13384792_13384794_20231114_105141_EER_ctf_estimate_diag.jpg
FoilHole_14463361_Data_13384792_13384794_20231114_113846_EER_ctf_estimate_diag.jpg
FoilHole_14466247_Data_13384795_13384797_20231114_115624_EER_ctf_estimate_diag.jpg
FoilHole_14469102_Data_13384795_13384797_20231114_123210_EER_ctf_estimate_diag.jpg
FoilHole_14469152_Data_13384798_13384800_20231114_123039_EER_ctf_estimate_diag.jpg
FoilHole_14473085_Data_13384798_13384800_20231114_131150_EER_ctf_estimate_diag.jpg
FoilHole_14473089_Data_13384798_13384800_20231114_125554_EER_ctf_estimate_diag.jpg
FoilHole_14476967_Data_13384795_13384797_20231114_132535_EER_ctf_estimate_diag.jpg
LOG summary: PROGRAM ctf_estimate
100. percent marker not found; recent CTF diagnostics: >>> CTF_ESTIMATE: 5 PART(S) COMPLETED IN 19.0 s **** SIMPLE_DISTR_CTF_ESTIMATE NORMAL STOP **** **** SIMPLE Git Commit: 3cad71a1 **** Execution time: 19.2 seconds
2_motion_correct6m 18.0s
FoilHole_13387161_Data_13384792_13384794_20231113_165813_EER_thumb.jpg
FoilHole_13387165_Data_13384789_13384791_20231113_170618_EER_thumb.jpg
FoilHole_13391968_Data_13384795_13384797_20231113_174255_EER_thumb.jpg
FoilHole_13391979_Data_13384789_13384791_20231113_172647_EER_thumb.jpg
FoilHole_13396191_Data_13384789_13384791_20231113_180300_EER_thumb.jpg
FoilHole_13396227_Data_13384798_13384800_20231113_181309_EER_thumb.jpg
FoilHole_13396273_Data_13384795_13384797_20231113_182757_EER_thumb.jpg
FoilHole_13400338_Data_13384795_13384797_20231113_185413_EER_thumb.jpg
FoilHole_14354074_Data_13384792_13384794_20231113_191229_EER_thumb.jpg
FoilHole_14358292_Data_13384798_13384800_20231113_202222_EER_thumb.jpg
FoilHole_14358323_Data_13384789_13384791_20231113_201921_EER_thumb.jpg
FoilHole_14362957_Data_13384789_13384791_20231113_204512_EER_thumb.jpg
FoilHole_14362991_Data_13384795_13384797_20231113_204437_EER_thumb.jpg
FoilHole_14367062_Data_13384789_13384791_20231113_213638_EER_thumb.jpg
FoilHole_14367067_Data_13384789_13384791_20231113_214059_EER_thumb.jpg
FoilHole_14367072_Data_13384789_13384791_20231113_213306_EER_thumb.jpg
FoilHole_14367086_Data_13384792_13384794_20231113_212858_EER_thumb.jpg
FoilHole_14370764_Data_13384792_13384794_20231113_215208_EER_thumb.jpg
FoilHole_14370782_Data_13384798_13384800_20231113_220255_EER_thumb.jpg
FoilHole_14370802_Data_13384792_13384794_20231113_220044_EER_thumb.jpg
FoilHole_14374378_Data_13384789_13384791_20231113_222157_EER_thumb.jpg
FoilHole_14374442_Data_13384789_13384791_20231113_225417_EER_thumb.jpg
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LOG summary: PROGRAM motion_correct
100. percent marker not found; recent motion-correction diagnostics: **** SIMPLE_DISTR_MOTION_CORRECT NORMAL STOP **** **** SIMPLE Git Commit: 3cad71a1 **** Execution time: 378.0 seconds
1_import_movies28.5s
movthumb1.jpg
LOG summary: PROGRAM import_movies
>>> IMPORTED 50 MOVIE(S) >>> TOTAL NUMBER OF MOVIE(S): 50 **** IMPORT_MOVIES NORMAL STOP **** **** SIMPLE Git Commit: 3cad71a1 **** Execution time: 28.5 seconds