SIMPLE Test Report - trpm4

SIMPLE test run

Execution times

1h 05m 22.2sTotal across 11 timed test steps
Test stepProgramDuration
11_refine3D_autorefine3D_auto27m 33.4s1653.4 seconds
10_abinitio3Dabinitio3D17m 30.7s1050.7 seconds
9_abinitio3D_cavgsabinitio3D_cavgs8m 54.0s534.0 seconds
8_model_cavgs_rejectionmodel_cavgs_rejection1.4s1.4 seconds
7_abinitio2Dabinitio2D3m 01.4s181.4 seconds
6_extractextract3.6s3.6 seconds
5_pickpick55.3s55.3 seconds
4_selectionselection0.2s0.2 seconds
3_ctf_estimatectf_estimate28.4s28.4 seconds
2_motion_correctmotion_correct6m 44.3s404.3 seconds
1_import_moviesimport_movies9.5s9.5 seconds

Total is the sum of execution times recorded by SIMPLE in this test LOG.

11_refine3D_auto27m 33.4s

LOG summary: PROGRAM refine3D_auto

>>> % GREEDY SEARCHES                                 0.000
>>> DIST BTW BEST ORIS (DEG) AVG/SDEV/MIN/MAX:        1.222        2.909        0.000       70.472
>>> IN-PLANE DIST      (DEG) AVG/SDEV/MIN/MAX:        0.698        3.021        0.000       94.091
>>> SHIFT INCR ARG           AVG/SDEV/MIN/MAX:        0.149        0.177        0.000        1.112
>>> % SEARCH SPACE SCANNED   AVG/SDEV/MIN/MAX:      100.000        0.000      100.000      100.000
>>> MATCHING  LOW-PASS LIMIT AVG/SDEV/MIN/MAX:        4.010        0.000        4.010        4.010
>>> ESTIMATED LOW-PASS LIMIT AVG/SDEV/MIN/MAX:        0.000        0.000        0.000        0.000
>>> RESOLUTION @ FSC=0.143   AVG/SDEV/MIN/MAX:       11.886        0.000       11.886       11.886
>>> SCORE [0,1]              AVG/SDEV/MIN/MAX:        0.373        0.002        0.369        0.380
>>> -------------------- SETTINGS --------------------
>>> | REFINEMENT MODE               | prob_neigh
>>> | PROB NEIGH MODE               | state
>>> | NSPACE PROJECTION DIRECTIONS  | 20000
>>> | GAU REGULARIZATION            | off
>>> | ML  REGULARIZATION            | on, TAU: 1.00000000
>>> | CONICAL REGULARIZATION        | off
>>> | ICM REGULARIZATION            | off
>>> | AUTOMASKING                   | on, MODE: yes
>>> | FILTER MODE                   | nonuniform
>>> --------------------------------------------------
>>> CONVERGED: no
**** SIMPLE_REFINE3D NORMAL STOP ****
>>> # SHARED-MEMORY THREADS USED BY rec3D MASTER PROCESS:      8
**** Execution time:     1.8 seconds
**** Execution time:     1.9 seconds
**** Execution time:     2.0 seconds
**** Execution time:     2.0 seconds
**** Execution time:     2.1 seconds
**** Execution time:     2.1 seconds
**** Execution time:     2.1 seconds
**** Execution time:     2.2 seconds
**** Execution time:     2.2 seconds
**** Execution time:     2.2 seconds
>>> FSC AREA SCORE / CONICAL FSC AREA RATIO (cFAR) STATE  1:   0.3753
>>> AUTOMASKING
>>> FOUND:     220 CONNECTED COMPONENT(S)
**** SIMPLE_VOLASSEMBLE NORMAL STOP ****
**** SIMPLE_RECONSTRUCT3D NORMAL STOP ****
**** SIMPLE Git Commit:  a7ca03a6
**** Execution time:  1653.4 seconds

10_abinitio3D17m 30.7s

orthogonal_reprojs_state01.jpg orthogonal_reprojs_state01.jpg

LOG summary: PROGRAM abinitio3D

Recent FSC=0.143 resolution estimates:
>>> RESOLUTION @ FSC=0.143   AVG/SDEV/MIN/MAX:       16.640        0.000       16.640       16.640
>>> RESOLUTION @ FSC=0.143   AVG/SDEV/MIN/MAX:       15.848        0.000       15.848       15.848
>>> RESOLUTION @ FSC=0.143   AVG/SDEV/MIN/MAX:       15.127        0.000       15.127       15.127
>>> RESOLUTION @ FSC=0.143   AVG/SDEV/MIN/MAX:       13.312        0.000       13.312       13.312
>>> RESOLUTION @ FSC=0.143   AVG/SDEV/MIN/MAX:       13.312        0.000       13.312       13.312
>>> RESOLUTION @ FSC=0.143   AVG/SDEV/MIN/MAX:       13.312        0.000       13.312       13.312
>>> RESOLUTION @ FSC=0.143   AVG/SDEV/MIN/MAX:       13.312        0.000       13.312       13.312
>>> RESOLUTION @ FSC=0.143   AVG/SDEV/MIN/MAX:       13.312        0.000       13.312       13.312
>>> RESOLUTION @ FSC=0.143   AVG/SDEV/MIN/MAX:       12.800        0.000       12.800       12.800
>>> RESOLUTION @ FSC=0.143   AVG/SDEV/MIN/MAX:       12.800        0.000       12.800       12.800
>>> RESOLUTION @ FSC=0.143   AVG/SDEV/MIN/MAX:       12.800        0.000       12.800       12.800
>>> RESOLUTION @ FSC=0.143   AVG/SDEV/MIN/MAX:       12.800        0.000       12.800       12.800
>>> RESOLUTION @ FSC=0.143   AVG/SDEV/MIN/MAX:       12.800        0.000       12.800       12.800
>>> RESOLUTION @ FSC=0.143   AVG/SDEV/MIN/MAX:       12.800        0.000       12.800       12.800
>>> RESOLUTION @ FSC=0.143   AVG/SDEV/MIN/MAX:       12.326        0.000       12.326       12.326
>>> RESOLUTION @ FSC=0.143   AVG/SDEV/MIN/MAX:       12.326        0.000       12.326       12.326
>>> RESOLUTION @ FSC=0.143   AVG/SDEV/MIN/MAX:       12.326        0.000       12.326       12.326
>>> RESOLUTION @ FSC=0.143   AVG/SDEV/MIN/MAX:       12.326        0.000       12.326       12.326
>>> RESOLUTION @ FSC=0.143   AVG/SDEV/MIN/MAX:       12.326        0.000       12.326       12.326
>>> RESOLUTION @ FSC=0.143   AVG/SDEV/MIN/MAX:       12.326        0.000       12.326       12.326

Status:
**** Execution time:     1.6 seconds
**** Execution time:     1.7 seconds
**** Execution time:     1.9 seconds
**** Execution time:     2.1 seconds
**** Execution time:     2.1 seconds
**** Execution time:     2.1 seconds
**** Execution time:     2.1 seconds
**** Execution time:     2.1 seconds
**** Execution time:     2.1 seconds
**** Execution time:     2.1 seconds
**** SIMPLE_VOLASSEMBLE NORMAL STOP ****
**** SIMPLE_RECONSTRUCT3D NORMAL STOP ****
**** SIMPLE_BOOTSTRAP_REC3D NORMAL STOP ****
**** SIMPLE_ABINITIO3D NORMAL STOP ****
**** SIMPLE Git Commit:  a7ca03a6
**** Execution time:  1050.7 seconds

9_abinitio3D_cavgs8m 54.0s

LOG summary: PROGRAM abinitio3D_cavgs

>>> FSC AREA SCORE / CONICAL FSC AREA RATIO (cFAR) STATE  1:   0.0246
**** SIMPLE_VOLASSEMBLE NORMAL STOP ****
**** SIMPLE_RECONSTRUCT3D NORMAL STOP ****
>>> BOOTSTRAP_REC3D SIGMA SCALE STATE 1:      10.000
>>> BOOTSTRAP_REC3D WROTE SIGMA STAR: sigma2_it_97.star
>>> BOOTSTRAP_REC3D PASS 2: EUCLID ML-REGULARIZED RECONSTRUCTION
>>> FSC AREA SCORE / CONICAL FSC AREA RATIO (cFAR) STATE  1:   0.0231
**** SIMPLE_VOLASSEMBLE NORMAL STOP ****
**** SIMPLE_RECONSTRUCT3D NORMAL STOP ****
**** SIMPLE_BOOTSTRAP_REC3D NORMAL STOP ****
>>>
>>> RE-PROJECTION OF THE FINAL VOLUME
>>>
>>> GENERATING PROJECTIONS
**** SIMPLE_REPROJECT NORMAL STOP ****
>>> SHIFTING IMAGES
CLASS:    25 RANK:     1 CORR:   0.37
CLASS:    42 RANK:     2 CORR:   0.37
CLASS:    21 RANK:     3 CORR:   0.37
CLASS:    28 RANK:     4 CORR:   0.37
CLASS:    52 RANK:     5 CORR:   0.37
CLASS:    84 RANK:     6 CORR:   0.37
CLASS:    26 RANK:     7 CORR:   0.36
CLASS:     6 RANK:     8 CORR:   0.36
CLASS:    61 RANK:     9 CORR:   0.36
CLASS:    22 RANK:    10 CORR:   0.36
CLASS:    74 RANK:    11 CORR:   0.36
CLASS:     1 RANK:    12 CORR:   0.36
CLASS:    13 RANK:    13 CORR:   0.35
CLASS:    71 RANK:    14 CORR:   0.35
CLASS:    78 RANK:    15 CORR:   0.35
CLASS:     4 RANK:    16 CORR:   0.34
CLASS:     2 RANK:    17 CORR:   0.33
CLASS:    20 RANK:    18 CORR:   0.32
CLASS:    11 RANK:    19 CORR:   0.32
CLASS:    59 RANK:    20 CORR:   0.30
**** SIMPLE_RANK_CAVGS NORMAL STOP ****
**** SIMPLE_ABINITIO3D_CAVGS NORMAL STOP ****
**** SIMPLE Git Commit:  a7ca03a6
**** Execution time:   534.0 seconds

8_model_cavgs_rejection1.4s

LOG summary: PROGRAM model_cavgs_rejection

 >>> PROGRAM: model_cavgs_rejection
>>> EXECUTION DIRECTORY: 8_model_cavgs_rejection
>>> CAVG QUALITY MODEL          : chunk100mics
>>> CAVG QUALITY CONTEXT        : chunk
>>> DEFAULT HARD GATES REJECTED:     68
>>> CAVG QUALITY SELECTED / REJECTED :     20 /     70
>>> CAVG QUALITY THRESHOLD RAW / OFFSET / EFFECTIVE :    0.350 /    0.000 /    0.350
>>> CAVG QUALITY SEPARATION / USED THRESHOLD :    0.000 USED=T
>>> WROTE cavgs_quality_features.txt
>>> WROTE quality_selected_cavgs.mrc #CAVGS:     20
>>> WROTE quality_rejected_cavgs.mrc #CAVGS:     70
>>> WROTE hard_gate_rejections.mrc #CAVGS:     68
>>> WROTE quality_ranked_cavgs.mrc #CAVGS:     90
>>> WROTE quality_ranked_cavgs.txt
**** SIMPLE_MODEL_CAVGS_REJECTION NORMAL STOP ****
**** SIMPLE Git Commit:  a7ca03a6
**** Execution time:     1.4 seconds

7_abinitio2D3m 01.4s

cavgs_iter027.jpg cavgs_iter027.jpg

LOG summary: PROGRAM abinitio2D

Final class ranking and status:
CLASS:    22 RANK:     1 POP:   57 RES:  15.13
CLASS:    26 RANK:     2 POP:   81 RES:  16.64
CLASS:    78 RANK:     3 POP:   81 RES:  16.64
CLASS:    71 RANK:     4 POP:   45 RES:  16.64
CLASS:    42 RANK:     5 POP:   86 RES:  17.52
CLASS:    25 RANK:     6 POP:   88 RES:  17.52
CLASS:     6 RANK:     7 POP:   51 RES:  17.52
CLASS:    48 RANK:     8 POP:  116 RES:  19.58
CLASS:    37 RANK:     9 POP:    5 RES:  20.80
CLASS:    74 RANK:    10 POP:   70 RES:  20.80
CLASS:    62 RANK:    11 POP:   64 RES:  22.19
CLASS:    30 RANK:    12 POP:   26 RES:  22.19
CLASS:    11 RANK:    13 POP:   53 RES:  22.19
CLASS:    21 RANK:    14 POP:   59 RES:  22.19
CLASS:    59 RANK:    15 POP:   48 RES:  22.19
CLASS:    23 RANK:    16 POP:   29 RES:  23.77
CLASS:    34 RANK:    17 POP:    4 RES:  23.77
CLASS:    52 RANK:    18 POP:   89 RES:  23.77
CLASS:    13 RANK:    19 POP:   48 RES:  23.77
CLASS:    82 RANK:    20 POP:    8 RES:  23.77
CLASS:    41 RANK:    21 POP:   19 RES:  23.77
CLASS:     2 RANK:    22 POP:   54 RES:  23.77
CLASS:    12 RANK:    23 POP:   17 RES:  25.60
CLASS:    28 RANK:    24 POP:   54 RES:  25.60
CLASS:    84 RANK:    25 POP:   45 RES:  25.60
CLASS:     1 RANK:    26 POP:   50 RES:  25.60
CLASS:    61 RANK:    27 POP:   56 RES:  25.60
CLASS:    20 RANK:    28 POP:   38 RES:  30.25
CLASS:     7 RANK:    29 POP:   64 RES:  33.28
CLASS:     4 RANK:    30 POP:   17 RES:  33.28
CLASS:    46 RANK:    31 POP:   16 RES:  36.98
CLASS:    66 RANK:    32 POP:  109 RES:  36.98
CLASS:     8 RANK:    33 POP:   12 RES:  36.98
CLASS:    57 RANK:    34 POP:   12 RES:  41.60
CLASS:    39 RANK:    35 POP:    6 RES:  41.60
CLASS:    54 RANK:    36 POP:   89 RES:  41.60
CLASS:     5 RANK:    37 POP:   74 RES:  41.60
CLASS:    70 RANK:    38 POP:   79 RES:  41.60
CLASS:    58 RANK:    39 POP:   15 RES:  47.54
CLASS:    88 RANK:    40 POP:   11 RES:  47.54
CLASS:    83 RANK:    41 POP:  149 RES:  47.54
CLASS:    72 RANK:    42 POP:    6 RES:  47.54
CLASS:    44 RANK:    43 POP:   48 RES:  47.54
CLASS:    73 RANK:    44 POP:   13 RES:  47.54
CLASS:    81 RANK:    45 POP:    5 RES:  55.47
CLASS:    14 RANK:    46 POP:    8 RES:  55.47
CLASS:    56 RANK:    47 POP:   91 RES:  55.47
CLASS:    27 RANK:    48 POP:   46 RES:  55.47
CLASS:    53 RANK:    49 POP:   79 RES:  55.47
CLASS:     3 RANK:    50 POP:    4 RES:  55.47
CLASS:    50 RANK:    51 POP:   81 RES:  55.47
CLASS:    49 RANK:    52 POP:   14 RES:  55.47
CLASS:    45 RANK:    53 POP:  110 RES:  55.47
CLASS:    86 RANK:    54 POP:   22 RES:  55.47
CLASS:    40 RANK:    55 POP:  106 RES:  55.47
CLASS:    43 RANK:    56 POP:  122 RES:  55.47
CLASS:     9 RANK:    57 POP:  118 RES:  55.47
CLASS:    68 RANK:    58 POP:   10 RES:  55.47
CLASS:    63 RANK:    59 POP:   13 RES:  66.56
CLASS:    15 RANK:    60 POP:   72 RES:  66.56
CLASS:    24 RANK:    61 POP:   28 RES:  66.56
CLASS:    47 RANK:    62 POP:   73 RES:  66.56
CLASS:    90 RANK:    63 POP:   13 RES:  66.56
CLASS:    80 RANK:    64 POP:   93 RES:  66.56
CLASS:    77 RANK:    65 POP:   25 RES:  66.56
CLASS:    35 RANK:    66 POP:   66 RES:  66.56
CLASS:    69 RANK:    67 POP:    9 RES:  66.56
CLASS:    67 RANK:    68 POP:  101 RES:  66.56
CLASS:    16 RANK:    69 POP:   84 RES:  66.56
CLASS:    29 RANK:    70 POP:    9 RES:  83.20
CLASS:    55 RANK:    71 POP:   65 RES:  83.20
CLASS:    10 RANK:    72 POP:   96 RES:  83.20
CLASS:    38 RANK:    73 POP:   90 RES:  83.20
CLASS:    32 RANK:    74 POP:   11 RES:  83.20
CLASS:    60 RANK:    75 POP:   86 RES: 110.93
CLASS:    89 RANK:    76 POP:   79 RES: 110.93
CLASS:    19 RANK:    77 POP:   73 RES: 110.93
CLASS:    18 RANK:    78 POP:   73 RES: 166.40

Status:
**** SIMPLE_MAKE_CAVGS NORMAL STOP ****
**** Execution time:     2.3 seconds
**** SIMPLE_MAKE_CAVGS NORMAL STOP ****
**** Execution time:     2.3 seconds
**** SIMPLE_MAKE_CAVGS NORMAL STOP ****
**** Execution time:     2.4 seconds
**** SIMPLE_CAVGASSEMBLE NORMAL STOP ****
**** SIMPLE_DISTR_MAKE_CAVGS NORMAL STOP ****
**** SIMPLE_RANK_CAVGS NORMAL STOP ****
**** SIMPLE_ABINITIO2D NORMAL STOP ****
**** SIMPLE Git Commit:  a7ca03a6
**** Execution time:   181.4 seconds

6_extract3.6s

LOG summary: PROGRAM extract

Lines after the last 100. percent of the micrographs processed:
**** SIMPLE_EXTRACT NORMAL STOP ****
**** Execution time:     1.6 seconds
**** SIMPLE_EXTRACT NORMAL STOP ****
**** Execution time:     1.7 seconds
**** SIMPLE_EXTRACT NORMAL STOP ****
**** Execution time:     1.7 seconds
**** SIMPLE_EXTRACT_DISTR NORMAL STOP ****
**** SIMPLE Git Commit:  a7ca03a6
**** Execution time:     3.6 seconds

5_pick55.3s

LOG summary: PROGRAM pick

Lines after the last 100. percent of the micrographs processed:
**** SIMPLE_PICK NORMAL STOP ****
**** Execution time:    53.8 seconds
**** SIMPLE_DISTR_PICK NORMAL STOP ****
**** SIMPLE Git Commit:  a7ca03a6
**** Execution time:    55.3 seconds

4_selection0.2s

LOG summary: PROGRAM selection

Final class ranking and status:

**** SELECTION NORMAL STOP ****
**** SIMPLE Git Commit:  a7ca03a6
**** Execution time:     0.2 seconds

3_ctf_estimate28.4s

FoilHole_13387205_Data_13384792_13384794_20231113_170320_EER_ctf_estimate_diag.jpg FoilHole_13387205_Data_13384792_13384794_20231113_170320_EER_ctf_estimate_diag.jpg
FoilHole_13391949_Data_13384795_13384797_20231113_172152_EER_ctf_estimate_diag.jpg FoilHole_13391949_Data_13384795_13384797_20231113_172152_EER_ctf_estimate_diag.jpg
FoilHole_13396210_Data_13384789_13384791_20231113_180608_EER_ctf_estimate_diag.jpg FoilHole_13396210_Data_13384789_13384791_20231113_180608_EER_ctf_estimate_diag.jpg
FoilHole_13400322_Data_13384792_13384794_20231113_190201_EER_ctf_estimate_diag.jpg FoilHole_13400322_Data_13384792_13384794_20231113_190201_EER_ctf_estimate_diag.jpg
FoilHole_14354138_Data_13384789_13384791_20231113_192539_EER_ctf_estimate_diag.jpg FoilHole_14354138_Data_13384789_13384791_20231113_192539_EER_ctf_estimate_diag.jpg
FoilHole_14358305_Data_13384795_13384797_20231113_200137_EER_ctf_estimate_diag.jpg FoilHole_14358305_Data_13384795_13384797_20231113_200137_EER_ctf_estimate_diag.jpg
FoilHole_14358322_Data_13384795_13384797_20231113_201909_EER_ctf_estimate_diag.jpg FoilHole_14358322_Data_13384795_13384797_20231113_201909_EER_ctf_estimate_diag.jpg
FoilHole_14362957_Data_13384795_13384797_20231113_204524_EER_ctf_estimate_diag.jpg FoilHole_14362957_Data_13384795_13384797_20231113_204524_EER_ctf_estimate_diag.jpg
FoilHole_14362983_Data_13384789_13384791_20231113_210054_EER_ctf_estimate_diag.jpg FoilHole_14362983_Data_13384789_13384791_20231113_210054_EER_ctf_estimate_diag.jpg
FoilHole_14370787_Data_13384795_13384797_20231113_215719_EER_ctf_estimate_diag.jpg FoilHole_14370787_Data_13384795_13384797_20231113_215719_EER_ctf_estimate_diag.jpg
FoilHole_14370798_Data_13384789_13384791_20231113_221628_EER_ctf_estimate_diag.jpg FoilHole_14370798_Data_13384789_13384791_20231113_221628_EER_ctf_estimate_diag.jpg
FoilHole_14374420_Data_13384789_13384791_20231113_225307_EER_ctf_estimate_diag.jpg FoilHole_14374420_Data_13384789_13384791_20231113_225307_EER_ctf_estimate_diag.jpg
FoilHole_14378407_Data_13384798_13384800_20231113_225934_EER_ctf_estimate_diag.jpg FoilHole_14378407_Data_13384798_13384800_20231113_225934_EER_ctf_estimate_diag.jpg
FoilHole_14378416_Data_13384789_13384791_20231113_230250_EER_ctf_estimate_diag.jpg FoilHole_14378416_Data_13384789_13384791_20231113_230250_EER_ctf_estimate_diag.jpg
FoilHole_14378446_Data_13384789_13384791_20231113_231155_EER_ctf_estimate_diag.jpg FoilHole_14378446_Data_13384789_13384791_20231113_231155_EER_ctf_estimate_diag.jpg
FoilHole_14378498_Data_13384798_13384800_20231113_232918_EER_ctf_estimate_diag.jpg FoilHole_14378498_Data_13384798_13384800_20231113_232918_EER_ctf_estimate_diag.jpg
FoilHole_14382702_Data_13384792_13384794_20231113_234412_EER_ctf_estimate_diag.jpg FoilHole_14382702_Data_13384792_13384794_20231113_234412_EER_ctf_estimate_diag.jpg
FoilHole_14382715_Data_13384789_13384791_20231113_235134_EER_ctf_estimate_diag.jpg FoilHole_14382715_Data_13384789_13384791_20231113_235134_EER_ctf_estimate_diag.jpg
FoilHole_14382739_Data_13384792_13384794_20231113_235316_EER_ctf_estimate_diag.jpg FoilHole_14382739_Data_13384792_13384794_20231113_235316_EER_ctf_estimate_diag.jpg
FoilHole_14382756_Data_13384795_13384797_20231114_000538_EER_ctf_estimate_diag.jpg FoilHole_14382756_Data_13384795_13384797_20231114_000538_EER_ctf_estimate_diag.jpg
FoilHole_14386552_Data_13384789_13384791_20231114_003023_EER_ctf_estimate_diag.jpg FoilHole_14386552_Data_13384789_13384791_20231114_003023_EER_ctf_estimate_diag.jpg
FoilHole_14390463_Data_13384798_13384800_20231114_010806_EER_ctf_estimate_diag.jpg FoilHole_14390463_Data_13384798_13384800_20231114_010806_EER_ctf_estimate_diag.jpg
FoilHole_14394704_Data_13384795_13384797_20231114_020341_EER_ctf_estimate_diag.jpg FoilHole_14394704_Data_13384795_13384797_20231114_020341_EER_ctf_estimate_diag.jpg
FoilHole_14401721_Data_13384792_13384794_20231114_023717_EER_ctf_estimate_diag.jpg FoilHole_14401721_Data_13384792_13384794_20231114_023717_EER_ctf_estimate_diag.jpg
FoilHole_14401762_Data_13384795_13384797_20231114_025150_EER_ctf_estimate_diag.jpg FoilHole_14401762_Data_13384795_13384797_20231114_025150_EER_ctf_estimate_diag.jpg
FoilHole_14405445_Data_13384789_13384791_20231114_031716_EER_ctf_estimate_diag.jpg FoilHole_14405445_Data_13384789_13384791_20231114_031716_EER_ctf_estimate_diag.jpg
FoilHole_14408791_Data_13384798_13384800_20231114_040043_EER_ctf_estimate_diag.jpg FoilHole_14408791_Data_13384798_13384800_20231114_040043_EER_ctf_estimate_diag.jpg
FoilHole_14412932_Data_13384792_13384794_20231114_042455_EER_ctf_estimate_diag.jpg FoilHole_14412932_Data_13384792_13384794_20231114_042455_EER_ctf_estimate_diag.jpg
FoilHole_14419833_Data_13384792_13384794_20231114_054246_EER_ctf_estimate_diag.jpg FoilHole_14419833_Data_13384792_13384794_20231114_054246_EER_ctf_estimate_diag.jpg
FoilHole_14423490_Data_13384789_13384791_20231114_054852_EER_ctf_estimate_diag.jpg FoilHole_14423490_Data_13384789_13384791_20231114_054852_EER_ctf_estimate_diag.jpg
FoilHole_14423515_Data_13384792_13384794_20231114_060133_EER_ctf_estimate_diag.jpg FoilHole_14423515_Data_13384792_13384794_20231114_060133_EER_ctf_estimate_diag.jpg
FoilHole_14423525_Data_13384789_13384791_20231114_060547_EER_ctf_estimate_diag.jpg FoilHole_14423525_Data_13384789_13384791_20231114_060547_EER_ctf_estimate_diag.jpg
FoilHole_14430015_Data_13384789_13384791_20231114_064815_EER_ctf_estimate_diag.jpg FoilHole_14430015_Data_13384789_13384791_20231114_064815_EER_ctf_estimate_diag.jpg
FoilHole_14433390_Data_13384792_13384794_20231114_071245_EER_ctf_estimate_diag.jpg FoilHole_14433390_Data_13384792_13384794_20231114_071245_EER_ctf_estimate_diag.jpg
FoilHole_14433435_Data_13384789_13384791_20231114_073221_EER_ctf_estimate_diag.jpg FoilHole_14433435_Data_13384789_13384791_20231114_073221_EER_ctf_estimate_diag.jpg
FoilHole_14433437_Data_13384792_13384794_20231114_073250_EER_ctf_estimate_diag.jpg FoilHole_14433437_Data_13384792_13384794_20231114_073250_EER_ctf_estimate_diag.jpg
FoilHole_14433438_Data_13384795_13384797_20231114_073319_EER_ctf_estimate_diag.jpg FoilHole_14433438_Data_13384795_13384797_20231114_073319_EER_ctf_estimate_diag.jpg
FoilHole_14433480_Data_13384792_13384794_20231114_074102_EER_ctf_estimate_diag.jpg FoilHole_14433480_Data_13384792_13384794_20231114_074102_EER_ctf_estimate_diag.jpg
FoilHole_14437427_Data_13384795_13384797_20231114_075122_EER_ctf_estimate_diag.jpg FoilHole_14437427_Data_13384795_13384797_20231114_075122_EER_ctf_estimate_diag.jpg
FoilHole_14440636_Data_13384798_13384800_20231114_082435_EER_ctf_estimate_diag.jpg FoilHole_14440636_Data_13384798_13384800_20231114_082435_EER_ctf_estimate_diag.jpg
FoilHole_14443622_Data_13384789_13384791_20231114_084002_EER_ctf_estimate_diag.jpg FoilHole_14443622_Data_13384789_13384791_20231114_084002_EER_ctf_estimate_diag.jpg
FoilHole_14443645_Data_13384792_13384794_20231114_085417_EER_ctf_estimate_diag.jpg FoilHole_14443645_Data_13384792_13384794_20231114_085417_EER_ctf_estimate_diag.jpg
FoilHole_14449621_Data_13384789_13384791_20231114_093938_EER_ctf_estimate_diag.jpg FoilHole_14449621_Data_13384789_13384791_20231114_093938_EER_ctf_estimate_diag.jpg
FoilHole_14456721_Data_13384795_13384797_20231114_104601_EER_ctf_estimate_diag.jpg FoilHole_14456721_Data_13384795_13384797_20231114_104601_EER_ctf_estimate_diag.jpg
FoilHole_14459647_Data_13384789_13384791_20231114_110546_EER_ctf_estimate_diag.jpg FoilHole_14459647_Data_13384789_13384791_20231114_110546_EER_ctf_estimate_diag.jpg
FoilHole_14463356_Data_13384792_13384794_20231114_113143_EER_ctf_estimate_diag.jpg FoilHole_14463356_Data_13384792_13384794_20231114_113143_EER_ctf_estimate_diag.jpg
FoilHole_14469129_Data_13384795_13384797_20231114_121658_EER_ctf_estimate_diag.jpg FoilHole_14469129_Data_13384795_13384797_20231114_121658_EER_ctf_estimate_diag.jpg
FoilHole_14469171_Data_13384795_13384797_20231114_122345_EER_ctf_estimate_diag.jpg FoilHole_14469171_Data_13384795_13384797_20231114_122345_EER_ctf_estimate_diag.jpg
FoilHole_14473126_Data_13384789_13384791_20231114_130843_EER_ctf_estimate_diag.jpg FoilHole_14473126_Data_13384789_13384791_20231114_130843_EER_ctf_estimate_diag.jpg
FoilHole_14476976_Data_13384798_13384800_20231114_132740_EER_ctf_estimate_diag.jpg FoilHole_14476976_Data_13384798_13384800_20231114_132740_EER_ctf_estimate_diag.jpg

LOG summary: PROGRAM ctf_estimate

Lines after final 100. percent processed marker:
**** SIMPLE_CTF_ESTIMATE NORMAL STOP ****
**** Execution time:    26.5 seconds
**** SIMPLE_DISTR_CTF_ESTIMATE NORMAL STOP ****
**** SIMPLE Git Commit:  a7ca03a6
**** Execution time:    28.4 seconds
Searched directory : /usr/local/data/actions-runner/SIMPLE_data_testing/SIMPLE_data_testing/SIMPLE_data_testing/trpm4/2_motion_correct
Filter kind        : mrc
Found 50 file(s). Written to filetab.txt

2_motion_correct6m 44.3s

FoilHole_13387205_Data_13384792_13384794_20231113_170320_EER_thumb.jpg FoilHole_13387205_Data_13384792_13384794_20231113_170320_EER_thumb.jpg
FoilHole_13391949_Data_13384795_13384797_20231113_172152_EER_thumb.jpg FoilHole_13391949_Data_13384795_13384797_20231113_172152_EER_thumb.jpg
FoilHole_13396210_Data_13384789_13384791_20231113_180608_EER_thumb.jpg FoilHole_13396210_Data_13384789_13384791_20231113_180608_EER_thumb.jpg
FoilHole_13400322_Data_13384792_13384794_20231113_190201_EER_thumb.jpg FoilHole_13400322_Data_13384792_13384794_20231113_190201_EER_thumb.jpg
FoilHole_14354138_Data_13384789_13384791_20231113_192539_EER_thumb.jpg FoilHole_14354138_Data_13384789_13384791_20231113_192539_EER_thumb.jpg
FoilHole_14358305_Data_13384795_13384797_20231113_200137_EER_thumb.jpg FoilHole_14358305_Data_13384795_13384797_20231113_200137_EER_thumb.jpg
FoilHole_14358322_Data_13384795_13384797_20231113_201909_EER_thumb.jpg FoilHole_14358322_Data_13384795_13384797_20231113_201909_EER_thumb.jpg
FoilHole_14362957_Data_13384795_13384797_20231113_204524_EER_thumb.jpg FoilHole_14362957_Data_13384795_13384797_20231113_204524_EER_thumb.jpg
FoilHole_14362983_Data_13384789_13384791_20231113_210054_EER_thumb.jpg FoilHole_14362983_Data_13384789_13384791_20231113_210054_EER_thumb.jpg
FoilHole_14370787_Data_13384795_13384797_20231113_215719_EER_thumb.jpg FoilHole_14370787_Data_13384795_13384797_20231113_215719_EER_thumb.jpg
FoilHole_14370798_Data_13384789_13384791_20231113_221628_EER_thumb.jpg FoilHole_14370798_Data_13384789_13384791_20231113_221628_EER_thumb.jpg
FoilHole_14374420_Data_13384789_13384791_20231113_225307_EER_thumb.jpg FoilHole_14374420_Data_13384789_13384791_20231113_225307_EER_thumb.jpg
FoilHole_14378407_Data_13384798_13384800_20231113_225934_EER_thumb.jpg FoilHole_14378407_Data_13384798_13384800_20231113_225934_EER_thumb.jpg
FoilHole_14378416_Data_13384789_13384791_20231113_230250_EER_thumb.jpg FoilHole_14378416_Data_13384789_13384791_20231113_230250_EER_thumb.jpg
FoilHole_14378446_Data_13384789_13384791_20231113_231155_EER_thumb.jpg FoilHole_14378446_Data_13384789_13384791_20231113_231155_EER_thumb.jpg
FoilHole_14378498_Data_13384798_13384800_20231113_232918_EER_thumb.jpg FoilHole_14378498_Data_13384798_13384800_20231113_232918_EER_thumb.jpg
FoilHole_14382702_Data_13384792_13384794_20231113_234412_EER_thumb.jpg FoilHole_14382702_Data_13384792_13384794_20231113_234412_EER_thumb.jpg
FoilHole_14382715_Data_13384789_13384791_20231113_235134_EER_thumb.jpg FoilHole_14382715_Data_13384789_13384791_20231113_235134_EER_thumb.jpg
FoilHole_14382739_Data_13384792_13384794_20231113_235316_EER_thumb.jpg FoilHole_14382739_Data_13384792_13384794_20231113_235316_EER_thumb.jpg
FoilHole_14382756_Data_13384795_13384797_20231114_000538_EER_thumb.jpg FoilHole_14382756_Data_13384795_13384797_20231114_000538_EER_thumb.jpg
FoilHole_14386552_Data_13384789_13384791_20231114_003023_EER_thumb.jpg FoilHole_14386552_Data_13384789_13384791_20231114_003023_EER_thumb.jpg
FoilHole_14390463_Data_13384798_13384800_20231114_010806_EER_thumb.jpg FoilHole_14390463_Data_13384798_13384800_20231114_010806_EER_thumb.jpg
FoilHole_14394704_Data_13384795_13384797_20231114_020341_EER_thumb.jpg FoilHole_14394704_Data_13384795_13384797_20231114_020341_EER_thumb.jpg
FoilHole_14401721_Data_13384792_13384794_20231114_023717_EER_thumb.jpg FoilHole_14401721_Data_13384792_13384794_20231114_023717_EER_thumb.jpg
FoilHole_14401762_Data_13384795_13384797_20231114_025150_EER_thumb.jpg FoilHole_14401762_Data_13384795_13384797_20231114_025150_EER_thumb.jpg
FoilHole_14405445_Data_13384789_13384791_20231114_031716_EER_thumb.jpg FoilHole_14405445_Data_13384789_13384791_20231114_031716_EER_thumb.jpg
FoilHole_14408791_Data_13384798_13384800_20231114_040043_EER_thumb.jpg FoilHole_14408791_Data_13384798_13384800_20231114_040043_EER_thumb.jpg
FoilHole_14412932_Data_13384792_13384794_20231114_042455_EER_thumb.jpg FoilHole_14412932_Data_13384792_13384794_20231114_042455_EER_thumb.jpg
FoilHole_14419833_Data_13384792_13384794_20231114_054246_EER_thumb.jpg FoilHole_14419833_Data_13384792_13384794_20231114_054246_EER_thumb.jpg
FoilHole_14423490_Data_13384789_13384791_20231114_054852_EER_thumb.jpg FoilHole_14423490_Data_13384789_13384791_20231114_054852_EER_thumb.jpg
FoilHole_14423515_Data_13384792_13384794_20231114_060133_EER_thumb.jpg FoilHole_14423515_Data_13384792_13384794_20231114_060133_EER_thumb.jpg
FoilHole_14423525_Data_13384789_13384791_20231114_060547_EER_thumb.jpg FoilHole_14423525_Data_13384789_13384791_20231114_060547_EER_thumb.jpg
FoilHole_14430015_Data_13384789_13384791_20231114_064815_EER_thumb.jpg FoilHole_14430015_Data_13384789_13384791_20231114_064815_EER_thumb.jpg
FoilHole_14433390_Data_13384792_13384794_20231114_071245_EER_thumb.jpg FoilHole_14433390_Data_13384792_13384794_20231114_071245_EER_thumb.jpg
FoilHole_14433435_Data_13384789_13384791_20231114_073221_EER_thumb.jpg FoilHole_14433435_Data_13384789_13384791_20231114_073221_EER_thumb.jpg
FoilHole_14433437_Data_13384792_13384794_20231114_073250_EER_thumb.jpg FoilHole_14433437_Data_13384792_13384794_20231114_073250_EER_thumb.jpg
FoilHole_14433438_Data_13384795_13384797_20231114_073319_EER_thumb.jpg FoilHole_14433438_Data_13384795_13384797_20231114_073319_EER_thumb.jpg
FoilHole_14433480_Data_13384792_13384794_20231114_074102_EER_thumb.jpg FoilHole_14433480_Data_13384792_13384794_20231114_074102_EER_thumb.jpg
FoilHole_14437427_Data_13384795_13384797_20231114_075122_EER_thumb.jpg FoilHole_14437427_Data_13384795_13384797_20231114_075122_EER_thumb.jpg
FoilHole_14440636_Data_13384798_13384800_20231114_082435_EER_thumb.jpg FoilHole_14440636_Data_13384798_13384800_20231114_082435_EER_thumb.jpg
FoilHole_14443622_Data_13384789_13384791_20231114_084002_EER_thumb.jpg FoilHole_14443622_Data_13384789_13384791_20231114_084002_EER_thumb.jpg
FoilHole_14443645_Data_13384792_13384794_20231114_085417_EER_thumb.jpg FoilHole_14443645_Data_13384792_13384794_20231114_085417_EER_thumb.jpg
FoilHole_14449621_Data_13384789_13384791_20231114_093938_EER_thumb.jpg FoilHole_14449621_Data_13384789_13384791_20231114_093938_EER_thumb.jpg
FoilHole_14456721_Data_13384795_13384797_20231114_104601_EER_thumb.jpg FoilHole_14456721_Data_13384795_13384797_20231114_104601_EER_thumb.jpg
FoilHole_14459647_Data_13384789_13384791_20231114_110546_EER_thumb.jpg FoilHole_14459647_Data_13384789_13384791_20231114_110546_EER_thumb.jpg
FoilHole_14463356_Data_13384792_13384794_20231114_113143_EER_thumb.jpg FoilHole_14463356_Data_13384792_13384794_20231114_113143_EER_thumb.jpg
FoilHole_14469129_Data_13384795_13384797_20231114_121658_EER_thumb.jpg FoilHole_14469129_Data_13384795_13384797_20231114_121658_EER_thumb.jpg
FoilHole_14469171_Data_13384795_13384797_20231114_122345_EER_thumb.jpg FoilHole_14469171_Data_13384795_13384797_20231114_122345_EER_thumb.jpg
FoilHole_14473126_Data_13384789_13384791_20231114_130843_EER_thumb.jpg FoilHole_14473126_Data_13384789_13384791_20231114_130843_EER_thumb.jpg
FoilHole_14476976_Data_13384798_13384800_20231114_132740_EER_thumb.jpg FoilHole_14476976_Data_13384798_13384800_20231114_132740_EER_thumb.jpg

LOG summary: PROGRAM motion_correct

Lines after final 100. percent processed marker:
**** SIMPLE_MOTION_CORRECT NORMAL STOP ****
**** Execution time:   402.5 seconds
**** SIMPLE_DISTR_MOTION_CORRECT NORMAL STOP ****
**** SIMPLE Git Commit:  a7ca03a6
**** Execution time:   404.3 seconds

1_import_movies9.5s

LOG summary: PROGRAM import_movies

>>> IMPORTED     50 MOVIE(S)
>>> TOTAL NUMBER OF MOVIE(S):    50
**** IMPORT_MOVIES NORMAL STOP ****
**** SIMPLE Git Commit:  a7ca03a6
**** Execution time:     9.5 seconds