SIMPLE Test Report - clc
SIMPLE test run
Execution times
1h 18m 27.2sTotal across 10 timed test steps
| Test step | Program | Duration |
|---|---|---|
| 10_refine3D_auto | refine3D_auto | 17m 46.2s1066.2 seconds |
| 9_abinitio3D | abinitio3D | 41m 52.0s2512.0 seconds |
| 8_abinitio3D_cavgs | abinitio3D_cavgs | 7m 50.0s470.0 seconds |
| 7_model_cavgs_rejection | model_cavgs_rejection | 1.7s1.7 seconds |
| 6_abinitio2D | abinitio2D | 3m 52.2s232.2 seconds |
| 5_extract | extract | 5.2s5.2 seconds |
| 4_pick | pick | 54.5s54.5 seconds |
| 3_ctf_estimate | ctf_estimate | 18.2s18.2 seconds |
| 2_motion_correct | motion_correct | 5m 27.2s327.2 seconds |
| 1_import_movies | import_movies | 20.0s20.0 seconds |
Total is the sum of execution times recorded by SIMPLE in this test LOG.
10_refine3D_auto17m 46.2s
orientations_distribution_state01.jpg
orthogonal_reprojs_state01.jpg
LOG summary: PROGRAM refine3D_auto
>>> % SEARCH SPACE SCANNED AVG/SDEV/MIN/MAX: 100.000 0.000 100.000 100.000 >>> MATCHING LOW-PASS LIMIT (THIS ITERATION) 4.010 >>> NU HANDOFF LP (NEXT) AVG/SDEV/MIN/MAX: 4.010 0.000 4.010 4.010 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 4.267 0.000 4.267 4.267 >>> RESOLUTION @ FSC=0.5 AVG/SDEV/MIN/MAX: 7.081 0.000 7.081 7.081 >>> SCORE [0,1] AVG/SDEV/MIN/MAX: 0.379 0.002 0.373 0.400 >>> -------------------- SETTINGS -------------------- >>> | REFINEMENT MODE | prob_neigh >>> | PROB NEIGH MODE | state >>> | NSPACE PROJECTION DIRECTIONS | 20000 >>> | GAU REGULARIZATION | off >>> | ML REGULARIZATION | on, TAU: 1.00000000 >>> | CONICAL REGULARIZATION | off >>> | ICM REGULARIZATION | off >>> | AUTOMASKING | on, MODE: yes >>> | FILTER MODE | nonuniform >>> -------------------------------------------------- >>> CONVERGED: no **** SIMPLE_CALC_GROUP_SIGMAS NORMAL STOP **** **** SIMPLE_REFINE3D NORMAL STOP **** >>> >>> RECONSTRUCTION AT ORIGINAL SAMPLING >>> >>> FINAL RECONSTRUCTION SAMPLING: box=256 smpd= 1.3000 >>> FINAL RECONSTRUCTION: reusing committed canonical sigmas >>> # SHARED-MEMORY THREADS USED BY rec3D MASTER PROCESS: 8 >>> RECONSTRUCT3D: 10 PART(S) COMPLETED IN 7.0 s >>> AUTOMASKING LOW-PASS/DILATION LAYERS/EDGE: 20.00 A/ 6 voxels/ 6 voxels >>> FOUND: 1 CONNECTED COMPONENT(S) >>> FSC MODE: STATE 1, backend=gridding support=sphere posthoc_mask=density phase_randomization=yes >>> FSC AREA SCORE / CONICAL FSC AREA RATIO (cFAR) STATE 1: 0.2171 **** SIMPLE_VOLASSEMBLE NORMAL STOP **** >>> POSTPROCESS: FSC from fsc_state01.bin, 0.5/0.143 at 7.08/ 4.27 A >>> B-FACTOR (UNFILTERED PAIR) DETERMINED TO: -51.18 >>> POSTPROCESS: B -51.18 capped at the cutoff shell: gain 2.02 from shell 78 to Nyquist >>> POSTPROCESS: ML-regularized map (solve_kind=gridding_regularized), its prior already FSC-weighted it: no FSC weighting >>> POSTPROCESS: B-sharpened, then Butterworth low-pass at 4.27 A **** SIMPLE_RECONSTRUCT3D NORMAL STOP **** **** SIMPLE Git Commit: 3cad71a1 **** Execution time: 1066.2 seconds
9_abinitio3D41m 52.0s
orientations_distribution_state01.jpg
orientations_distribution_state01_stage04.jpg
orientations_distribution_state01_stage05.jpg
orientations_distribution_state01_stage06.jpg
orientations_distribution_state01_stage07.jpg
orientations_distribution_state01_stage08.jpg
orthogonal_reprojs_state01.jpg
orthogonal_reprojs_state01_stage04.jpg
orthogonal_reprojs_state01_stage05.jpg
orthogonal_reprojs_state01_stage06.jpg
orthogonal_reprojs_state01_stage07.jpg
orthogonal_reprojs_state01_stage08.jpg
LOG summary: PROGRAM abinitio3D
Recent FSC=0.143 resolution estimates: >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 4.622 0.000 4.622 4.622 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 4.622 0.000 4.622 4.622 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 4.559 0.000 4.559 4.559 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 4.559 0.000 4.559 4.559 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 4.559 0.000 4.559 4.559 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 4.497 0.000 4.497 4.497 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 4.322 0.000 4.322 4.322 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 4.379 0.000 4.379 4.379 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 4.379 0.000 4.379 4.379 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 4.379 0.000 4.379 4.379 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 4.379 0.000 4.379 4.379 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 4.379 0.000 4.379 4.379 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 4.379 0.000 4.379 4.379 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 4.322 0.000 4.322 4.322 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 4.267 0.000 4.267 4.267 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 4.322 0.000 4.322 4.322 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 4.322 0.000 4.322 4.322 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 4.322 0.000 4.322 4.322 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 4.322 0.000 4.322 4.322 >>> RESOLUTION @ FSC=0.143 AVG/SDEV/MIN/MAX: 4.267 0.000 4.267 4.267 Status: **** SIMPLE_VOLASSEMBLE NORMAL STOP **** **** SIMPLE_POSTPROCESS NORMAL STOP **** **** SIMPLE_CALC_GROUP_SIGMAS NORMAL STOP **** **** SIMPLE_REFINE3D NORMAL STOP **** **** SIMPLE_CALC_PSPEC_ASSEMBLE NORMAL STOP **** **** SIMPLE_CALC_PSPEC NORMAL STOP **** **** SIMPLE_VOLASSEMBLE NORMAL STOP **** **** SIMPLE_RECONSTRUCT3D NORMAL STOP **** **** SIMPLE_CALC_GROUP_SIGMAS NORMAL STOP **** **** SIMPLE_REFINE3D NORMAL STOP **** **** SIMPLE_VOLASSEMBLE NORMAL STOP **** **** SIMPLE_RECONSTRUCT3D NORMAL STOP **** **** SIMPLE_BOOTSTRAP_REC3D NORMAL STOP **** **** SIMPLE_ABINITIO3D NORMAL STOP **** **** SIMPLE Git Commit: 3cad71a1 **** Execution time: 2512.0 seconds
8_abinitio3D_cavgs7m 50.0s
orientations_distribution_state01.jpg
LOG summary: PROGRAM abinitio3D_cavgs
>>> BOOTSTRAP_REC3D: EUCLID ML-REGULARIZED RECONSTRUCTION ON RESIDUAL SIGMAS, SIGMA ITERATION 99 >>> FSC MODE: STATE 1, backend=gridding support=sphere posthoc_mask=none phase_randomization=no >>> FSC AREA SCORE / CONICAL FSC AREA RATIO (cFAR) STATE 1: 0.0972 **** SIMPLE_VOLASSEMBLE NORMAL STOP **** **** SIMPLE_RECONSTRUCT3D NORMAL STOP **** **** SIMPLE_BOOTSTRAP_REC3D NORMAL STOP **** >>> >>> RE-PROJECTION OF THE FINAL VOLUME >>> >>> GENERATING PROJECTIONS **** SIMPLE_REPROJECT NORMAL STOP **** >>> SHIFTING IMAGES CLASS: 18 RANK: 1 CORR: 1.00 CLASS: 88 RANK: 2 CORR: 1.00 CLASS: 38 RANK: 3 CORR: 0.93 CLASS: 76 RANK: 4 CORR: 0.93 CLASS: 62 RANK: 5 CORR: 0.93 CLASS: 73 RANK: 6 CORR: 0.92 CLASS: 42 RANK: 7 CORR: 0.89 CLASS: 23 RANK: 8 CORR: 0.88 CLASS: 28 RANK: 9 CORR: 0.83 CLASS: 37 RANK: 10 CORR: 0.82 CLASS: 74 RANK: 11 CORR: 0.81 CLASS: 34 RANK: 12 CORR: 0.79 CLASS: 50 RANK: 13 CORR: 0.77 CLASS: 39 RANK: 14 CORR: 0.75 CLASS: 32 RANK: 15 CORR: 0.75 CLASS: 26 RANK: 16 CORR: 0.71 CLASS: 57 RANK: 17 CORR: 0.69 CLASS: 49 RANK: 18 CORR: 0.69 CLASS: 6 RANK: 19 CORR: 0.68 CLASS: 60 RANK: 20 CORR: 0.64 CLASS: 48 RANK: 21 CORR: 0.64 CLASS: 44 RANK: 22 CORR: 0.63 CLASS: 12 RANK: 23 CORR: 0.62 CLASS: 85 RANK: 24 CORR: 0.58 **** SIMPLE_RANK_CAVGS NORMAL STOP **** **** SIMPLE_ABINITIO3D_CAVGS NORMAL STOP **** **** SIMPLE Git Commit: 3cad71a1 **** Execution time: 470.0 seconds
7_model_cavgs_rejection1.7s
LOG summary: PROGRAM model_cavgs_rejection
>>> PROGRAM: model_cavgs_rejection >>> EXECUTION DIRECTORY: 7_model_cavgs_rejection >>> CAVG QUALITY MODEL : chunk100mics >>> CAVG QUALITY MODEL SOURCE : built-in preset chunk100mics >>> CAVG QUALITY MODEL CONTEXT : chunk >>> CAVG HARD-GATE CONTEXT : chunk >>> CAVG HARD-GATE SOURCE : model artifact >>> DEFAULT HARD GATES REJECTED: 59 >>> CAVG QUALITY SELECTED / REJECTED : 24 / 66 >>> CAVG QUALITY THRESHOLD RAW / OFFSET / EFFECTIVE : 0.350 / 0.000 / 0.350 >>> CAVG QUALITY SEPARATION / USED THRESHOLD : 0.000 USED=T >>> WROTE cavgs_quality_features.txt >>> WROTE quality_selected_cavgs.mrc #CAVGS: 24 >>> WROTE quality_rejected_cavgs.mrc #CAVGS: 66 >>> WROTE hard_gate_rejections.mrc #CAVGS: 59 >>> WROTE quality_ranked_cavgs.mrc #CAVGS: 90 >>> WROTE quality_ranked_cavgs.txt **** SIMPLE_MODEL_CAVGS_REJECTION NORMAL STOP **** **** SIMPLE Git Commit: 3cad71a1 **** Execution time: 1.7 seconds
6_abinitio2D3m 52.2s
cavgs_iter027.jpg
LOG summary: PROGRAM abinitio2D
Final class ranking and status: CLASS: 38 RANK: 1 POP: 418 RES: 6.28 CLASS: 49 RANK: 2 POP: 264 RES: 6.93 CLASS: 39 RANK: 3 POP: 431 RES: 6.93 CLASS: 50 RANK: 4 POP: 193 RES: 7.40 CLASS: 37 RANK: 5 POP: 278 RES: 7.74 CLASS: 23 RANK: 6 POP: 269 RES: 7.92 CLASS: 57 RANK: 7 POP: 307 RES: 8.12 CLASS: 28 RANK: 8 POP: 236 RES: 8.12 CLASS: 88 RANK: 9 POP: 133 RES: 8.99 CLASS: 73 RANK: 10 POP: 238 RES: 8.99 CLASS: 34 RANK: 11 POP: 273 RES: 9.24 CLASS: 18 RANK: 12 POP: 146 RES: 10.40 CLASS: 32 RANK: 13 POP: 152 RES: 10.74 CLASS: 26 RANK: 14 POP: 240 RES: 14.47 CLASS: 58 RANK: 15 POP: 125 RES: 15.13 CLASS: 70 RANK: 16 POP: 64 RES: 17.52 CLASS: 60 RANK: 17 POP: 227 RES: 18.49 CLASS: 48 RANK: 18 POP: 189 RES: 18.49 CLASS: 42 RANK: 19 POP: 233 RES: 18.49 CLASS: 76 RANK: 20 POP: 69 RES: 19.58 CLASS: 17 RANK: 21 POP: 86 RES: 19.58 CLASS: 85 RANK: 22 POP: 70 RES: 19.58 CLASS: 6 RANK: 23 POP: 71 RES: 20.80 CLASS: 44 RANK: 24 POP: 136 RES: 20.80 CLASS: 79 RANK: 25 POP: 16 RES: 20.80 CLASS: 43 RANK: 26 POP: 47 RES: 20.80 CLASS: 56 RANK: 27 POP: 77 RES: 23.77 CLASS: 63 RANK: 28 POP: 47 RES: 23.77 CLASS: 62 RANK: 29 POP: 39 RES: 23.77 CLASS: 12 RANK: 30 POP: 63 RES: 25.60 CLASS: 87 RANK: 31 POP: 38 RES: 25.60 CLASS: 29 RANK: 32 POP: 29 RES: 25.60 CLASS: 68 RANK: 33 POP: 65 RES: 25.60 CLASS: 89 RANK: 34 POP: 15 RES: 27.73 CLASS: 86 RANK: 35 POP: 83 RES: 27.73 CLASS: 54 RANK: 36 POP: 23 RES: 27.73 CLASS: 80 RANK: 37 POP: 56 RES: 27.73 CLASS: 59 RANK: 38 POP: 22 RES: 30.25 CLASS: 55 RANK: 39 POP: 14 RES: 30.25 CLASS: 52 RANK: 40 POP: 38 RES: 30.25 CLASS: 24 RANK: 41 POP: 13 RES: 30.25 CLASS: 67 RANK: 42 POP: 6 RES: 30.25 CLASS: 84 RANK: 43 POP: 16 RES: 30.25 CLASS: 20 RANK: 44 POP: 44 RES: 30.25 CLASS: 77 RANK: 45 POP: 30 RES: 30.25 CLASS: 3 RANK: 46 POP: 49 RES: 33.28 CLASS: 10 RANK: 47 POP: 22 RES: 33.28 CLASS: 7 RANK: 48 POP: 23 RES: 36.98 CLASS: 61 RANK: 49 POP: 43 RES: 36.98 CLASS: 30 RANK: 50 POP: 21 RES: 36.98 CLASS: 14 RANK: 51 POP: 22 RES: 36.98 CLASS: 81 RANK: 52 POP: 16 RES: 36.98 CLASS: 74 RANK: 53 POP: 39 RES: 36.98 CLASS: 8 RANK: 54 POP: 60 RES: 36.98 CLASS: 15 RANK: 55 POP: 10 RES: 41.60 CLASS: 25 RANK: 56 POP: 74 RES: 41.60 CLASS: 5 RANK: 57 POP: 11 RES: 41.60 CLASS: 78 RANK: 58 POP: 64 RES: 41.60 CLASS: 66 RANK: 59 POP: 17 RES: 41.60 CLASS: 64 RANK: 60 POP: 17 RES: 41.60 CLASS: 82 RANK: 61 POP: 66 RES: 41.60 CLASS: 31 RANK: 62 POP: 50 RES: 47.54 CLASS: 27 RANK: 63 POP: 11 RES: 47.54 CLASS: 13 RANK: 64 POP: 65 RES: 47.54 CLASS: 47 RANK: 65 POP: 53 RES: 47.54 CLASS: 41 RANK: 66 POP: 57 RES: 47.54 CLASS: 40 RANK: 67 POP: 52 RES: 47.54 CLASS: 19 RANK: 68 POP: 53 RES: 47.54 CLASS: 71 RANK: 69 POP: 19 RES: 47.54 CLASS: 35 RANK: 70 POP: 13 RES: 47.54 CLASS: 11 RANK: 71 POP: 60 RES: 47.54 CLASS: 51 RANK: 72 POP: 86 RES: 55.47 CLASS: 45 RANK: 73 POP: 74 RES: 55.47 CLASS: 21 RANK: 74 POP: 60 RES: 55.47 CLASS: 83 RANK: 75 POP: 57 RES: 55.47 CLASS: 9 RANK: 76 POP: 7 RES: 55.47 CLASS: 72 RANK: 77 POP: 8 RES: 55.47 CLASS: 2 RANK: 78 POP: 4 RES: 55.47 CLASS: 69 RANK: 79 POP: 20 RES: 55.47 CLASS: 16 RANK: 80 POP: 63 RES: 55.47 CLASS: 90 RANK: 81 POP: 5 RES: 66.56 CLASS: 1 RANK: 82 POP: 7 RES: 66.56 CLASS: 33 RANK: 83 POP: 17 RES: 66.56 CLASS: 65 RANK: 84 POP: 80 RES: 66.56 CLASS: 46 RANK: 85 POP: 59 RES: 83.20 CLASS: 22 RANK: 86 POP: 3 RES: 83.20 CLASS: 53 RANK: 87 POP: 2 RES: 331.50 Status: **** SIMPLE_CAVGASSEMBLE NORMAL STOP **** **** SIMPLE_CALC_GROUP_SIGMAS NORMAL STOP **** **** SIMPLE_PROB_ALIGN2D NORMAL STOP **** **** SIMPLE_CAVGASSEMBLE NORMAL STOP **** **** SIMPLE_CALC_GROUP_SIGMAS NORMAL STOP **** **** SIMPLE_CLUSTER2D NORMAL STOP **** **** SIMPLE_CAVGASSEMBLE NORMAL STOP **** **** SIMPLE_DISTR_MAKE_CAVGS NORMAL STOP **** **** SIMPLE_RANK_CAVGS NORMAL STOP **** **** SIMPLE_ABINITIO2D NORMAL STOP **** **** SIMPLE Git Commit: 3cad71a1 **** Execution time: 232.2 seconds
5_extract5.2s
ptcls_sample.jpg
ptcls_sample_lp.jpg
LOG summary: PROGRAM extract
100. percent micrographs marker not found; recent extract diagnostics: >>> EXTRACT: 5 PART(S) COMPLETED IN 4.0 s **** SIMPLE_EXTRACT_DISTR NORMAL STOP **** **** SIMPLE Git Commit: 3cad71a1 **** Execution time: 5.2 seconds
4_pick54.5s
LOG summary: PROGRAM pick
100. percent micrographs marker not found; recent pick diagnostics: >>> PICK: 5 PART(S) COMPLETED IN 54.0 s **** SIMPLE_DISTR_PICK NORMAL STOP **** **** SIMPLE Git Commit: 3cad71a1 **** Execution time: 54.5 seconds
3_ctf_estimate18.2s
FoilHole_21972532_Data_21970621_21970623_20220920_222541_EER_ctf_estimate_diag.jpg
FoilHole_21972608_Data_21970630_21970632_20220920_224447_EER_ctf_estimate_diag.jpg
FoilHole_21972672_Data_21970621_21970623_20220920_234339_EER_ctf_estimate_diag.jpg
FoilHole_21972673_Data_21970621_21970623_20220920_234409_EER_ctf_estimate_diag.jpg
FoilHole_21981730_Data_21970627_21970629_20220921_015332_EER_ctf_estimate_diag.jpg
FoilHole_21981985_Data_21970627_21970629_20220921_020508_EER_ctf_estimate_diag.jpg
FoilHole_21991387_Data_21970621_21970623_20220921_022449_EER_ctf_estimate_diag.jpg
FoilHole_22001600_Data_21970621_21970623_20220921_052204_EER_ctf_estimate_diag.jpg
FoilHole_22001614_Data_21970621_21970623_20220921_054016_EER_ctf_estimate_diag.jpg
FoilHole_22001735_Data_21970630_21970632_20220921_063039_EER_ctf_estimate_diag.jpg
FoilHole_22001912_Data_21970627_21970629_20220921_064947_EER_ctf_estimate_diag.jpg
FoilHole_22012093_Data_21970624_21970626_20220921_065735_EER_ctf_estimate_diag.jpg
FoilHole_22012158_Data_21970630_21970632_20220921_081651_EER_ctf_estimate_diag.jpg
FoilHole_22012205_Data_21970630_21970632_20220921_073018_EER_ctf_estimate_diag.jpg
FoilHole_22012215_Data_21970630_21970632_20220921_075430_EER_ctf_estimate_diag.jpg
FoilHole_22022099_Data_21970624_21970626_20220921_095330_EER_ctf_estimate_diag.jpg
FoilHole_22022151_Data_21970627_21970629_20220921_100255_EER_ctf_estimate_diag.jpg
FoilHole_22032149_Data_21970627_21970629_20220921_124800_EER_ctf_estimate_diag.jpg
FoilHole_22041711_Data_21970630_21970632_20220921_130732_EER_ctf_estimate_diag.jpg
FoilHole_22041726_Data_21970621_21970623_20220921_131615_EER_ctf_estimate_diag.jpg
FoilHole_22041873_Data_21970621_21970623_20220921_142829_EER_ctf_estimate_diag.jpg
FoilHole_22041987_Data_21970627_21970629_20220921_144458_EER_ctf_estimate_diag.jpg
FoilHole_22049967_Data_21970627_21970629_20220921_154954_EER_ctf_estimate_diag.jpg
FoilHole_22050009_Data_21970624_21970626_20220921_152759_EER_ctf_estimate_diag.jpg
FoilHole_22050033_Data_21970624_21970626_20220921_155450_EER_ctf_estimate_diag.jpg
FoilHole_22050129_Data_21970621_21970623_20220921_164434_EER_ctf_estimate_diag.jpg
FoilHole_22050259_Data_21970624_21970626_20220921_165016_EER_ctf_estimate_diag.jpg
FoilHole_22059646_Data_21970621_21970623_20220921_172521_EER_ctf_estimate_diag.jpg
FoilHole_22059698_Data_21970630_21970632_20220921_184528_EER_ctf_estimate_diag.jpg
FoilHole_22059753_Data_21970630_21970632_20220921_181909_EER_ctf_estimate_diag.jpg
FoilHole_22059952_Data_21970624_21970626_20220921_181354_EER_ctf_estimate_diag.jpg
FoilHole_23027772_Data_21970621_21970623_20220921_214215_EER_ctf_estimate_diag.jpg
FoilHole_23035959_Data_21970627_21970629_20220921_230854_EER_ctf_estimate_diag.jpg
FoilHole_23035970_Data_21970630_21970632_20220921_234319_EER_ctf_estimate_diag.jpg
FoilHole_23036029_Data_21970621_21970623_20220921_233316_EER_ctf_estimate_diag.jpg
FoilHole_23036061_Data_21970630_21970632_20220921_223145_EER_ctf_estimate_diag.jpg
FoilHole_23053117_Data_21970621_21970623_20220922_025249_EER_ctf_estimate_diag.jpg
FoilHole_23053202_Data_21970621_21970623_20220922_023919_EER_ctf_estimate_diag.jpg
FoilHole_23061276_Data_21970630_21970632_20220922_040555_EER_ctf_estimate_diag.jpg
FoilHole_23061278_Data_21970624_21970626_20220922_041718_EER_ctf_estimate_diag.jpg
FoilHole_23061318_Data_21970630_21970632_20220922_033635_EER_ctf_estimate_diag.jpg
FoilHole_23061460_Data_21970630_21970632_20220922_043916_EER_ctf_estimate_diag.jpg
FoilHole_23061463_Data_21970624_21970626_20220922_045609_EER_ctf_estimate_diag.jpg
FoilHole_23069580_Data_21970630_21970632_20220922_060318_EER_ctf_estimate_diag.jpg
FoilHole_23069708_Data_21970627_21970629_20220922_055907_EER_ctf_estimate_diag.jpg
FoilHole_23069727_Data_21970627_21970629_20220922_070155_EER_ctf_estimate_diag.jpg
FoilHole_23069751_Data_21970621_21970623_20220922_063639_EER_ctf_estimate_diag.jpg
FoilHole_23078906_Data_21970630_21970632_20220922_071944_EER_ctf_estimate_diag.jpg
FoilHole_23079073_Data_21970621_21970623_20220922_083418_EER_ctf_estimate_diag.jpg
FoilHole_23087284_Data_21970630_21970632_20220922_090346_EER_ctf_estimate_diag.jpg
LOG summary: PROGRAM ctf_estimate
100. percent marker not found; recent CTF diagnostics: >>> CTF_ESTIMATE: 5 PART(S) COMPLETED IN 18.0 s **** SIMPLE_DISTR_CTF_ESTIMATE NORMAL STOP **** **** SIMPLE Git Commit: 3cad71a1 **** Execution time: 18.2 seconds
2_motion_correct5m 27.2s
FoilHole_21972532_Data_21970621_21970623_20220920_222541_EER_thumb.jpg
FoilHole_21972608_Data_21970630_21970632_20220920_224447_EER_thumb.jpg
FoilHole_21972672_Data_21970621_21970623_20220920_234339_EER_thumb.jpg
FoilHole_21972673_Data_21970621_21970623_20220920_234409_EER_thumb.jpg
FoilHole_21981730_Data_21970627_21970629_20220921_015332_EER_thumb.jpg
FoilHole_21981985_Data_21970627_21970629_20220921_020508_EER_thumb.jpg
FoilHole_21991387_Data_21970621_21970623_20220921_022449_EER_thumb.jpg
FoilHole_22001600_Data_21970621_21970623_20220921_052204_EER_thumb.jpg
FoilHole_22001614_Data_21970621_21970623_20220921_054016_EER_thumb.jpg
FoilHole_22001735_Data_21970630_21970632_20220921_063039_EER_thumb.jpg
FoilHole_22001912_Data_21970627_21970629_20220921_064947_EER_thumb.jpg
FoilHole_22012093_Data_21970624_21970626_20220921_065735_EER_thumb.jpg
FoilHole_22012158_Data_21970630_21970632_20220921_081651_EER_thumb.jpg
FoilHole_22012205_Data_21970630_21970632_20220921_073018_EER_thumb.jpg
FoilHole_22012215_Data_21970630_21970632_20220921_075430_EER_thumb.jpg
FoilHole_22022099_Data_21970624_21970626_20220921_095330_EER_thumb.jpg
FoilHole_22022151_Data_21970627_21970629_20220921_100255_EER_thumb.jpg
FoilHole_22032149_Data_21970627_21970629_20220921_124800_EER_thumb.jpg
FoilHole_22041711_Data_21970630_21970632_20220921_130732_EER_thumb.jpg
FoilHole_22041726_Data_21970621_21970623_20220921_131615_EER_thumb.jpg
FoilHole_22041873_Data_21970621_21970623_20220921_142829_EER_thumb.jpg
FoilHole_22041987_Data_21970627_21970629_20220921_144458_EER_thumb.jpg
FoilHole_22049967_Data_21970627_21970629_20220921_154954_EER_thumb.jpg
FoilHole_22050009_Data_21970624_21970626_20220921_152759_EER_thumb.jpg
FoilHole_22050033_Data_21970624_21970626_20220921_155450_EER_thumb.jpg
FoilHole_22050129_Data_21970621_21970623_20220921_164434_EER_thumb.jpg
FoilHole_22050259_Data_21970624_21970626_20220921_165016_EER_thumb.jpg
FoilHole_22059646_Data_21970621_21970623_20220921_172521_EER_thumb.jpg
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LOG summary: PROGRAM motion_correct
100. percent marker not found; recent motion-correction diagnostics: **** SIMPLE_DISTR_MOTION_CORRECT NORMAL STOP **** **** SIMPLE Git Commit: 3cad71a1 **** Execution time: 327.2 seconds
1_import_movies20.0s
movthumb1.jpg
LOG summary: PROGRAM import_movies
>>> IMPORTED 50 MOVIE(S) >>> TOTAL NUMBER OF MOVIE(S): 50 **** IMPORT_MOVIES NORMAL STOP **** **** SIMPLE Git Commit: 3cad71a1 **** Execution time: 20.0 seconds